Gene detail information of Glyur002353s00034538 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24625.1 | 6.00E-18 | zinc finger protein 7 |
| NR | XP_004509093.1 | 6.65E-67 | PREDICTED: zinc finger protein 7-like [Cicer arietinum] |
| Swissprot | tr|Q39266|ZFP7_ARATH | 1.00E-20 | Zinc finger protein 7 |
| trEMBL | tr|I1K296|I1K296_SOYBN | 2.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G21620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02353 | 31588 | 32235 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.011 |
| SRR1783600 | control | 1.999 |
| SRR1783602 | moderate drought stress | 0.914 |
| SRR1811619 | moderate drought stress | 0.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.121 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.144 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.592 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.453 |
| SRR2868004 | Drought Stress (root) | 3.870 |
| SRR2967015 | Control (root) | 2.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.365 |
| SRR9715740 | Leaf | 2.656 |
| SRR9715741 | Leaf | 2.284 |
| SRR9715739 | Root | 0.322 |
| SRR9715742 | Root | 0.910 |
| SRR9715743 | Root | 0.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.084 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.330 |
| SRR8400027 | Control - Root | 2.533 |