Gene detail information of Glyur002349s00033867 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26180.1 | 7.00E-70 | |
| NR | XP_003518819.1 | 1.14E-136 | PREDICTED: uncharacterized protein LOC100783446 [Glycine max] |
| COG | YP_007061547.1 | 3.00E-16 | hypothetical protein Syn6312_1862 [Synechococcus sp. PCC 6312] |
| trEMBL | tr|I1JEP9|I1JEP9_SOYBN | 7.00E-136 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G14240.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02349 | 18350 | 21959 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002349s00033867.1 | PF09991.4 | DUF2232 | 135 | 226 | 2.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.343 |
| SRR1783600 | control | 11.509 |
| SRR1783602 | moderate drought stress | 13.793 |
| SRR1811619 | moderate drought stress | 13.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.628 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.142 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.844 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.965 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.609 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.590 |
| SRR2868004 | Drought Stress (root) | 14.294 |
| SRR2967015 | Control (root) | 14.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.380 |
| SRR9715740 | Leaf | 26.850 |
| SRR9715741 | Leaf | 14.708 |
| SRR9715739 | Root | 11.359 |
| SRR9715742 | Root | 7.717 |
| SRR9715743 | Root | 9.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.975 |
| SRR8749028 | MeJA induced 9h | 6.135 |
| SRR8749029 | MeJA induced 9h | 4.842 |
| SRR8749030 | Uninduced | 5.372 |
| SRR8749031 | Uninduced | 5.014 |
| SRR8749032 | Uninduced | 3.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.394 |
| SRR8400027 | Control - Root | 16.122 |