Gene detail information of Glyur002341s00037863 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38380.1 | 2.00E-65 | Peroxidase superfamily protein |
| NR | KHN14344.1 | 2.37E-129 | Peroxidase 15 [Glycine soja] |
| Swissprot | tr|Q9LEH3|PER15_IPOBA | 2.00E-80 | Peroxidase 15 {ECO:0000303|PubMed:17936696} (Precursor) |
| trEMBL | tr|I1MG21|I1MG21_SOYBN | 8.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G13510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02341 | 31820 | 32688 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002341s00037863.1 | PF00141.18 | peroxidase | 2 | 155 | 1.60E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.731 |
| SRR1783600 | control | 3.266 |
| SRR1783602 | moderate drought stress | 0.504 |
| SRR1811619 | moderate drought stress | 0.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.626 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.766 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.344 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.367 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.406 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.331 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.398 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.491 |
| SRR2868004 | Drought Stress (root) | 21.785 |
| SRR2967015 | Control (root) | 29.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.965 |
| SRR9715740 | Leaf | 5.546 |
| SRR9715741 | Leaf | 16.397 |
| SRR9715739 | Root | 3.710 |
| SRR9715742 | Root | 6.151 |
| SRR9715743 | Root | 6.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.019 |
| SRR8749028 | MeJA induced 9h | 46.652 |
| SRR8749029 | MeJA induced 9h | 302.712 |
| SRR8749030 | Uninduced | 22.932 |
| SRR8749031 | Uninduced | 143.462 |
| SRR8749032 | Uninduced | 182.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.510 |
| SRR8400027 | Control - Root | 11.429 |