Gene detail

Gene detail information of Glyur002339s00035633

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G22060.1	2.00E-27
NR	KHN36452.1	0	hypothetical protein glysoja_041039 [Glycine soja]
trEMBL	tr\|K7LZT8\|K7LZT8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G21083.1}

Sequence

Transcript Sequence

>Glyur002339s00035633.1
ATGAAATCGAAGGTACCCAAGGGGTGGGACAAGCTGTTTGTTTCAGTTGTCTCCGTAGAAAATGGTAAAACAATTGCNAAGTCAAGCAAAGTGCCGGTGCGAAATGGGAGTTGTCAGTGGTCTGATACCTTTTCAGAATCCATATTGGTTTCAAGAGATGATTCTTCCAAGGAGATTGATGATTATCTCCTCAAACTTATTGTTGCAATGGGATCGTTAAGATCTGGAATCCTGGGAGAGGCCACNGTTAATATGAGCAGCTATGTGAGTTCAGATGCTGCTATGCCACTTTCAATCCCGCTGAATAAGAGCAAACATGGGACAGTTTTGCATGTAACTGTGCAGTGCCTTACACCAAGAACGAAACTCAGGGATCAAGAATCAAGCGAGACAGATTCCCATTTGAAAGCCAAGAATGAAAATAACCATGATGTGGCTGTCAAGCCAAATGGATATTGTTCATATGTACAGAGTGTTGAATCTTCCTCGGTTGATGATGTGGACTCTATCTTATCCCCCGGAGAAGCAACAAGTCTCTCTGGATCTGTNTCAAATTGCAGCTATAACTCAGCTGAAGGTTTCACAGGAAGGGAAAANTTCTCCCCATGTATCAGTGACAGCCAGAGCCTGACAGGAAGACAAGAATATTCAACCAGTTCCCAGAAAAGTGTATCCCACCACGATTACCCTGTTGATAACTCTTCTCAGTCGAATCATTCATCATTTAATTCCCAAGATATGCAAGACACTGGTGCATCATCTTCTCATATGACCAGTNCTTCTAATAACCGTTTGGAAGCTGCAGAAGGCACAAGTGAAGAGCTACGTGCAGAAGCAAAGATGTGGGAGATGAATGCCAGAAAGCTAATGGGTGACTTGGACATGTTGAGGACAGAATTCTCAGATCAATCCAAAAAGCTTTCAGCAGCATATGTAGAACGTGAAAGTTTGAAAAAAGAAGTTGAACAGTTAAAATTGTCGTCAGATTATCCAATAGTGAGACAGAAAGCATTGGAAGATTCAATATCTCAAGTTGAATGCATTCCAGAAATTGAAAACGCTCTAAAAGATGAATTGAAGTTTCAGAAAGAATCAAATGCTAACTTGTCTTTACAACTGAAGAAGAGCCAAGAAGCAAATGTTGAGCTTGTTNCTGTTCTCCAGGAGCTGGAAGAAACCATAGAAAGGCAGAAAGTTGAGATGGAAAACCTTTCATCACTACCTTCAAAATTCAGTAATCTGGAGAAATCTTTCCAACTAAGTTTAGAAGGAAACAGGAGCTTAATGCAAGAAATAGAACAGTTGGAGGAATCAAAGAAAAATCTGCTGGTTAAGGTGCNAGAGCTGGAAGAGTCATTGGAGGACAAAATGCGAGACATTGAAGATGCAAAGATTTCAAACAACAAAACACTTTCAGATATTGAGTTGGANTATGAAAGCAAATTATCTGCTAAAGAAGAAGAAATTTTAAGTTTGAAAGAAAGGCTGTTTGAAATTGAATCTCTNCCAGAAACCTGTAATGTGGAGACTATGTCCAGAAATGTAGGTGATGCAGATCTTCTGAGAGAAATTGAAGTGCTGAAAGAAAAAGTTCAGGAACTTGAGATGGACTGCAATGAGCTGACTGATGAAAACCTTGAGCTTTTANTCAAGCTAAAAGAAGCAAAGAACAATTCAAAAGATGGAGGTGGATCTGAACATCATTTGTCAAACAAGCTNAAAGATCAATCTTCTGCTAGCTTTGAGTCTGAAGTAAGCAACAATTCATTTCGAATATTCTATTCAGAAGACATGCTCCAGAGGGAAACCGCGAAGAAGATTAGTAATGATGGTGGTCATATTTCAATTCGAGAGCTTGAGACTTCNAAATCAGATCTAGAAGTCAAAATCACANGTTTGAATAATGAACTAACAAGTAAAACATCTGAGATGGCAAATCTTGAGGCTAGCTTATCATGTAAAGAAAAGGAGATTGGGGTTCTGCAGAAGCTTCTGAATGAGTTGGAAGCCAGGGTTTATCATCTGGAACAAGAGAAACTTCAACTAGAGGAACACATGGAGGTCATGATAAAAGAAAAAAAGCAAGAAATGGAGCTCCACATATCAGATATAGAACAAGAAAATGAACAATTGTCGACGCGCNTTTCTGTTTTAGAAGCTCAACTGAGAGATTTGACAAATGAACAAGAGTCCTGTTTATCAGAACTAGAGAATGCTAGATCTGAAGCTACAAGGCTCCGGGAGAAGATTATGGAGATGCAGTCTGAGATGGATTATTCCATAGAAGATTTGAAACAGAAATTAAAGGAGACACAATTTCATTGGTCAGAAGCACAAGAAGAATGTGAATATCTCAGAGGAGAAAATCAGCAGCTACATATTACCATTGAAAATCTTGCAGAGGAATGCAATTCATTTGAGAAGCTAAATGGGGATTTGAGGCAGCAAAAGTTGGAGTTAGGGGAATATTGCTCCCTTATGGGAGCCAGGTTGAGGGAATCAGATGAAAGATTTTTTGATTGCTCTGGAAGAGTGGAACTCGTAGAAAAGAAATTTGCTTTAATGCTGGAAGATATTGCATCAAAAGAGAAGCATCTATCTTCAAATATGGATGGTATTTTGGATGAAAATAGGAAACATATGGAGCAGAGTGAAAGCTTATTGAATCAGATGCAAATGGAGAAGATGGTGGAAATTCAGAACCTTAAAGTAGAAATTGAGAACCTCAGCATGAAACTTTCAGCAGCCTATGATGAAAAAGAGAGAATAGCTTCCAATNCTTTGCTTGAAGTATCCACATTACGTGCTGATAAAGCCAAACTGGAATCTGCTTTTGAAGAAGTTCAATCTAAAGTTATTTTGTCTAAGACTGAGGTTGATGTGATGCAGACTGAATGTGAACAAAAGCTGAAAGACCTAACAACTGAGCTCGCNGATCTCAAAATTAAAATGGAAACGCTGACAGCTGAACATGAGATGTTGTCGAAGCTGGTGGAGGACTACAAATCAAGAGAACTGAAATTCATAAGCACTATAAATGCCCTTGAATTAAAACTTACAGTCACTGAATATGAAAGACAACAATACATGAATGACTATGGAGATTTAAAGGTTCAGTTGCAGCGGACACATCAATTTGAAAATGAGATTATGGCTCTCAAGAGTGAGCTCAACGCTTCCAATTCTGAGAAAGAAAGACTGGAAGCCTCNTTGCGCTTGGCATCTGAACTATGTGAAGATCTGAAGGCAGAGAAGACATCATTTGAACTGAAGATATCAACCTTGGAGAAGGCTGCATCANAATTGGAGGACTGCAAGAGAACTAGAACATCCCTTGAAGAAAGGCTTATGCAGTTGGAGAATGACTTGAAGGCAAGAGGCCAGCATCAACACACCATACAACTGCTTGAGCAGGAAAAGGCNGAGTTTCAGAGAAAAGCTCAAGCCCTTGAAGAAGAATTGAAACTGATTAAGGAACAAAAGCGAAATCAAGTTTCGAAGTTAAACAGGAAAAGTTTACCTGTTCACGATGATCAGAAAGCCCCAAAACAAAATCCTGTGGTGAAGAATACCAATCAACATCGCAGTAATAGGAAAAGGCCAACTTTAAAGAATGACAGAGAAATCCTGAAAGATCAACAGGACCCTTATCATGGCAGCAAACATCAGAGTGAGGTGGAAACTGAACATGGACTTCTTGATGAAAGTGTTCGTGCTGTTGAAGTAGAGCCAGTATCGAAGACAAAATTGCTTGAGACCGAACAAGCAAAAGCAAAAGAAGCCAATAACATTTATGAAGTTCAACTTAACAGGTCACCATCTCAAGGCCGAAACAACAACAACCAGGCAAATGGCCCAGTAAAATCAACGGCTGAAGGAGAACTTGTGACAAAAGAAAGGTTTGAACGTACAAAATCAATGCTAGAGTCAGAGTTAAGAGATATTCGGGAGCGCTACTTCCACATGAGCCTTAAATATGCTGAGGTAGAAGCTGAGCGTGAAGAACTTGTAATGAAACTCAAGGTGGCCAAGAACAACAAAAAAGGATGGCTCTCATAGAACTATGATAGAACTATGAACAGTCTAATGACCCATTTTTTATACTTCCCACCCATCTCAGGTACCCTATTTCAGGAATTTGAAGTGCCAGTGAATCATTGATTTGGAGAA

Protein Sequence

>Glyur002339s00035633.1
MKSKVPKGWDKLFVSVVSVENGKTIAKSSKVPVRNGSCQWSDTFSESILVSRDDSSKEIDDYLLKLIVAMGSLRSGILGEATVNMSSYVSSDAAMPLSIPLNKSKHGTVLHVTVQCLTPRTKLRDQESSETDSHLKAKNENNHDVAVKPNGYCSYVQSVESSSVDDVDSILSPGEATSLSGSVSNCSYNSAEGFTGREXFSPCISDSQSLTGRQEYSTSSQKSVSHHDYPVDNSSQSNHSSFNSQDMQDTGASSSHMTSXSNNRLEAAEGTSEELRAEAKMWEMNARKLMGDLDMLRTEFSDQSKKLSAAYVERESLKKEVEQLKLSSDYPIVRQKALEDSISQVECIPEIENALKDELKFQKESNANLSLQLKKSQEANVELVXVLQELEETIERQKVEMENLSSLPSKFSNLEKSFQLSLEGNRSLMQEIEQLEESKKNLLVKVXELEESLEDKMRDIEDAKISNNKTLSDIELXYESKLSAKEEEILSLKERLFEIESLPETCNVETMSRNVGDADLLREIEVLKEKVQELEMDCNELTDENLELLXKLKEAKNNSKDGGGSEHHLSNKLKDQSSASFESEVSNNSFRIFYSEDMLQRETAKKISNDGGHISIRELETSKSDLEVKITXLNNELTSKTSEMANLEASLSCKEKEIGVLQKLLNELEARVYHLEQEKLQLEEHMEVMIKEKKQEMELHISDIEQENEQLSTRXSVLEAQLRDLTNEQESCLSELENARSEATRLREKIMEMQSEMDYSIEDLKQKLKETQFHWSEAQEECEYLRGENQQLHITIENLAEECNSFEKLNGDLRQQKLELGEYCSLMGARLRESDERFFDCSGRVELVEKKFALMLEDIASKEKHLSSNMDGILDENRKHMEQSESLLNQMQMEKMVEIQNLKVEIENLSMKLSAAYDEKERIASNXLLEVSTLRADKAKLESAFEEVQSKVILSKTEVDVMQTECEQKLKDLTTELADLKIKMETLTAEHEMLSKLVEDYKSRELKFISTINALELKLTVTEYERQQYMNDYGDLKVQLQRTHQFENEIMALKSELNASNSEKERLEASLRLASELCEDLKAEKTSFELKISTLEKAASXLEDCKRTRTSLEERLMQLENDLKARGQHQHTIQLLEQEKAEFQRKAQALEEELKLIKEQKRNQVSKLNRKSLPVHDDQKAPKQNPVVKNTNQHRSNRKRPTLKNDREILKDQQDPYHGSKHQSEVETEHGLLDESVRAVEVEPVSKTKLLETEQAKAKEANNIYEVQLNRSPSQGRNNNNQANGPVKSTAEGELVTKERFERTKSMLESELRDIRERYFHMSLKYAEVEAEREELVMKLKVAKNNKKGWLS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02339	31119	39614	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002339s00035633.1	PF10358.4	NT-C2	11	118	1.80E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.475
SRR1783600	control	1.484
SRR1783602	moderate drought stress	1.195
SRR1811619	moderate drought stress	1.157

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.820
DRR006520	Root Summer glycyrrhizin high producing strain	1.737
DRR006521	Root Winter glycyrrhizin high producing strain	0.455
DRR006522	Root Winter glycyrrhizin high producing strain	0.465
DRR006523	Root Summer glycyrrhizin low producing strain	1.064
DRR006524	Root Summer glycyrrhizin low producing strain	0.980
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.276
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.156

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.974
SRR2868004	Drought Stress (root)	3.373
SRR2967015	Control (root)	2.641

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.595
SRR9715740	Leaf	2.991
SRR9715741	Leaf	2.446
SRR9715739	Root	0.143
SRR9715742	Root	0.324
SRR9715743	Root	0.196

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.467
SRR8749028	MeJA induced 9h	1.370
SRR8749029	MeJA induced 9h	0.963
SRR8749030	Uninduced	0.180
SRR8749031	Uninduced	0.130
SRR8749032	Uninduced	0.123

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.589
SRR8400027	Control - Root	4.472