Gene detail information of Glyur002338s00036377 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17860.1 | 3.00E-31 | Kunitz family trypsin and protease inhibitor protein |
| NR | XP_003622420.1 | 1.99E-113 | Endopeptidase inhibitor [Medicago truncatula] |
| Swissprot | tr|P13087|MIRA_SYNDU | 1.00E-47 | Miraculin (Precursor) |
| trEMBL | tr|G7KRA4|G7KRA4_MEDTR | 7.00E-114 | Nodule Cysteine-Rich (NCR) secreted peptide {ECO:0000313|EMBL:AES78638.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02338 | 9496 | 10116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002338s00036377.1 | PF00197.13 | Kunitz_legume | 28 | 201 | 3.90E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.846 |
| SRR1783600 | control | 0.890 |
| SRR1783602 | moderate drought stress | 0.367 |
| SRR1811619 | moderate drought stress | 0.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.349 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.346 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.004 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.356 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.069 |
| SRR2868004 | Drought Stress (root) | 55.408 |
| SRR2967015 | Control (root) | 64.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.252 |
| SRR9715740 | Leaf | 0.101 |
| SRR9715741 | Leaf | 1.104 |
| SRR9715739 | Root | 4.685 |
| SRR9715742 | Root | 1.633 |
| SRR9715743 | Root | 1.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 58.211 |
| SRR8749028 | MeJA induced 9h | 139.948 |
| SRR8749029 | MeJA induced 9h | 132.444 |
| SRR8749030 | Uninduced | 78.082 |
| SRR8749031 | Uninduced | 351.723 |
| SRR8749032 | Uninduced | 263.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.470 |
| SRR8400027 | Control - Root | 18.466 |