Gene detail information of Glyur002334s00036085 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43945.1 | 2.00E-62 | |
| NR | XP_004499380.1 | 7.29E-124 | PREDICTED: uncharacterized protein LOC101501502 [Cicer arietinum] |
| COG | YP_001518791.1 | 7.00E-30 | hypothetical protein AM1_4497 [Acaryochloris marina MBIC11017] |
| trEMBL | tr|I3T1K7|I3T1K7_LOTJA | 2.00E-112 | Uncharacterized protein {ECO:0000313|EMBL:AFK46399.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02334 | 39150 | 40709 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.888 |
| SRR1783600 | control | 35.218 |
| SRR1783602 | moderate drought stress | 23.890 |
| SRR1811619 | moderate drought stress | 23.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.078 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.167 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.955 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.546 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.311 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 71.615 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.377 |
| SRR2868004 | Drought Stress (root) | 23.450 |
| SRR2967015 | Control (root) | 25.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.220 |
| SRR9715740 | Leaf | 5.255 |
| SRR9715741 | Leaf | 15.101 |
| SRR9715739 | Root | 2.438 |
| SRR9715742 | Root | 8.930 |
| SRR9715743 | Root | 10.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.641 |
| SRR8749028 | MeJA induced 9h | 13.396 |
| SRR8749029 | MeJA induced 9h | 14.047 |
| SRR8749030 | Uninduced | 3.259 |
| SRR8749031 | Uninduced | 4.396 |
| SRR8749032 | Uninduced | 5.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.484 |
| SRR8400027 | Control - Root | 44.865 |