Gene detail information of Glyur002328s00039192.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52310.10protein kinase family protein / C-type lectin domain-containing protein
NRKEH37621.10C-type lectin receptor-like tyrosine-kinase plant [Medicago truncatula]
COGYP_284821.11.00E-18protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprottr|Q9C823|Y1523_ARATH0C-type lectin receptor-like tyrosine-protein kinase At1g52310 (Precursor)
trEMBLtr|A0A072V7K8|A0A072V7K8_MEDTR0C-type lectin receptor-like tyrosine-kinase plant {ECO:0000313|EMBL:KEH37621.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold023282188326078-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002328s00039192.1PF00059.16Lectin_C211376.90E-11
Glyur002328s00039192.1PF07714.12Pkinase_Tyr2364949.50E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.412
SRR1783600control7.542
SRR1783602moderate drought stress8.857
SRR1811619moderate drought stress8.730

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.691
DRR006520Root Summer glycyrrhizin high producing strain9.388
DRR006521Root Winter glycyrrhizin high producing strain12.474
DRR006522Root Winter glycyrrhizin high producing strain12.623
DRR006523Root Summer glycyrrhizin low producing strain8.427
DRR006524Root Summer glycyrrhizin low producing strain8.809
DRR006525Leaf Summer glycyrrhizin high producing strain7.578
DRR006526Leaf Summer glycyrrhizin high producing strain7.577

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)13.520
SRR2868004Drought Stress (root)12.736
SRR2967015Control (root)12.310

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf13.751
SRR9715740Leaf13.396
SRR9715741Leaf15.485
SRR9715739Root6.555
SRR9715742Root12.402
SRR9715743Root10.661

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.686
SRR8749028MeJA induced 9h10.747
SRR8749029MeJA induced 9h8.775
SRR8749030Uninduced10.367
SRR8749031Uninduced9.079
SRR8749032Uninduced8.361

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root12.880
SRR8400027Control - Root10.583

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved