Gene detail information of Glyur002316s00041006 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G25680.1 | 2.00E-91 | molybdate transporter 1 |
| NR | KEH39812.1 | 2.64E-163 | sulfate transporter-like protein [Medicago truncatula] |
| COG | YP_004180804.1 | 5.00E-27 | sulfate transporter [Isosphaera pallida ATCC 43644] |
| Swissprot | tr|Q9SL95|MOT1_ARATH | 2.00E-110 | Molybdate transporter 1 |
| trEMBL | tr|A0A072VDF4|A0A072VDF4_MEDTR | 1.00E-163 | Sulfate transporter-like protein {ECO:0000313|EMBL:KEH39812.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02316 | 42549 | 43764 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.871 |
| SRR1783600 | control | 2.285 |
| SRR1783602 | moderate drought stress | 1.260 |
| SRR1811619 | moderate drought stress | 1.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.648 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.145 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.785 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.545 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.018 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.021 |
| SRR2868004 | Drought Stress (root) | 5.564 |
| SRR2967015 | Control (root) | 2.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.982 |
| SRR9715740 | Leaf | 1.622 |
| SRR9715741 | Leaf | 0.993 |
| SRR9715739 | Root | 12.718 |
| SRR9715742 | Root | 12.271 |
| SRR9715743 | Root | 13.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.890 |
| SRR8400027 | Control - Root | 3.947 |