Gene detail

Gene detail information of Glyur002316s00041003.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21270.1	4.00E-140	wall-associated kinase 2
NR	XP_006595272.1	0	PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
COG	YP_001958461.1	7.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	4.00E-175	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur002316s00041003.1
ATGAAAGTGATGGAGAAGCTGCATAGTACGCAACTGTTGATAATGGTTGCATATAATTTAGCCCTGCAGTTGGTAGGAGCAGTAATTATTGTAGCTGGTGATCAAGCAGCCCCTTCTCCAGCACCAGCACCAGCACCAACACCAGCACTGACACCAAAACAATTAGCACTGCCTCGCTGTCCTTACACTTGTGGAGGTGTAGAAGTCCCATACCCATTTGGGATAGGCAATTCGTCTACACCTGGCTATAATCAAAAACCCTGTTACTTGGAGGCCAGATTTGAGCTCACTTGCAACGACTCCAAATTATATCTGGGTGACTTTGAAGTTTTACGCATAGACATCCTCCAAGGTCAAATGGACGTGCTGTTTAATGTCTCAAACAGTTGCATTGATGAAGGTTACTGGCTCACCTTTGCTCATTTCAGCATTTCAAGGAAAGAAAACAAGTTCGTCACTGTTGGCTGCAACGGCTATGGTTATCTCCAAAGTGTTTATGACGAGGACTCATATACAACGGGGTGCGTATCAAAGTGTTCTAACCTTTCTGGCCTTAATATGCCTGCAGGAGTGTTCGACGATGGAACGTGTTCGGGTATAGGGTGTTGCCAGGTGGACATTCCTCCTTGGATGAGGAATATCACTATACAAGCTTATACCTTCAATTCATCGGAATATTCTTTTGGAGAATGCACCTATTCCTTCGTGGTCAAGAATCACAACTATATTTTTTCATCCATTCATATAGAAAACGAATTTCCTTACGAGGAATTCCCCATGGTTCTTGACTGGACCGTAGGTGACCACGACTGTAGTGTGGCTCCCGCGTGCAGGAACAATAGCCGTTGCAATGACACTGACACAGATTTTGGCCACCGGTGCGGATGCAATCCAGACATAAACGAATGTGAGACAACAAGTCATACATGCACAAGTAAAGATAACTGTGTCAACACCGATGGGTCTCACAGATGTTTCTGTCCTAAGGGGCAATTTGGAAATGGAACAAAAGAAGGAGGGTGCCACCAACGTGATACACGCACCAAGGTTGTCATCGGGGTTGGAACAGGAGTTATTGCTTTAGTTGTGGGGATTTCCTCGCTCTACTTAATATATCAGAAAAGGAAACTCATGGAACTGAAAGAGAAATTCTTCAAGCAAAATGGTGGTTACATTTTGCTACANCGACTCTCTAGAAGAGAAGACTCCTCCCAAATTGCTCAAATTTTCACAGAGGAAGAACTAAATAAGGCCACTAACAACTTTGACGAGAGCTTCATCATTGGCAGAGGTGGTTTTGGTACAGTTTTCAAAGGGTTCCTAGCAAATAACAGAATCGTTGCTATCAAGAAGTCCAAAATAATAGAGGCGAGCCAAAACGAGCAATTCATCAATGAGGTGATTGTTCTCTCCCAAATAAACCATAAGACTGTGGTCAAACTCTTGGGGTGTTGTTTGGAGACAGAAGTTCCTCTATTGGTTTATGAATTTGTCAGAAATGGTACCCTTTATGACTTTTTGCACAAAGAAGGTAAGGTGAATAATGCAAAATGGAAAACTCGTCTAAAGATAGCAGCAGAGGTAGCTGAAGCTCTGTCATATCTNCATTCATCTGTCTCGATACCCATTATCCACAGCGATGTTAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCCCAAGATCAAATTGAAATAGCCACAGTGGTGCAAGGGACACTTGGCTATTTGGACCCANAGTATATGCAAACACATCAACTAACTGAGAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTGGAGCTCCTAACAGGGGAGAAACCTGTCTCTTTTGATAGGACAGAAGAGAAAAGAAGNCTTCCTATGCACTTTCTATCTTGCTTAAAAGAGGATTGTGTTTTTGAAGTTCTNNAAGATGGAATCTTGAATGAAGAAAATGAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCATGAGACTTAAAGGGGNAAAAAGGCCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATATTGGGNTCAATGGAGAAGACTTCCTGGATTAATTCAGACATAAATGCAGAGGAGACTCGGTACTTGCTTCATGAAACATCATCGTCTAGCATTTATNAAACTGGTGATAGCAGCGGACACAGAAATACTGGGTATGACAGCTTGAAGGATGGTGTACAACTGATTGTCTTGGATGATGGAAGATGATTATGGGCATGGCAACAAATATATATATGCTCTATTTTATATCAATGTTCTGCTGCAACCTATTGTAATTTTTTTTTTGGTCAACGCCTATTGTAATCTTTATGCACAATCCTTTTGTAATTGTTTTGTTTTCATAAATGTGTATGTGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02316	12167	15691	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002316s00041003.1	PF13947.1	GUB_WAK_bind	58	157	5.90E-19
Glyur002316s00041003.1	PF08488.6	WAK	196	297	9.40E-05
Glyur002316s00041003.1	PF07645.10	EGF_CA	299	341	1.90E-07
Glyur002316s00041003.1	PF07714.12	Pkinase_Tyr	428	692	3.80E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.433
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.413

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.020
SRR2967015	Control (root)	0.021

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.710
SRR9715740	Leaf	25.243
SRR9715741	Leaf	35.906
SRR9715739	Root	0.000
SRR9715742	Root	0.382
SRR9715743	Root	0.406

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.271
SRR8749028	MeJA induced 9h	0.530
SRR8749029	MeJA induced 9h	0.401
SRR8749030	Uninduced	1.968
SRR8749031	Uninduced	0.255
SRR8749032	Uninduced	0.236

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.031
SRR8400027	Control - Root	0.179