Gene detail information of Glyur002314s00032884 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09890.1 | 2.00E-39 | Ankyrin repeat family protein |
| NR | XP_003535196.1 | 6.81E-69 | PREDICTED: tankyrase-1-like [Glycine max] |
| COG | YP_006448256.1 | 4.00E-09 | ankyrin repeat-containing protein [Desulfomonile tiedjei DSM 6799] |
| Swissprot | tr|Q9SAR5|AKR2_ARATH | 9.00E-14 | Ankyrin repeat domain-containing protein 2 |
| trEMBL | tr|I1L918|I1L918_SOYBN | 3.00E-69 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G06770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02314 | 13648 | 17084 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002314s00032884.1 | PF12796.2 | Ank_2 | 52 | 136 | 1.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.950 |
| SRR1783600 | control | 7.209 |
| SRR1783602 | moderate drought stress | 6.798 |
| SRR1811619 | moderate drought stress | 8.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.780 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.456 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.695 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.715 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.463 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.119 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.183 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.396 |
| SRR2868004 | Drought Stress (root) | 1.453 |
| SRR2967015 | Control (root) | 1.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.172 |
| SRR9715740 | Leaf | 0.104 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.024 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.822 |
| SRR8749028 | MeJA induced 9h | 1.115 |
| SRR8749029 | MeJA induced 9h | 1.435 |
| SRR8749030 | Uninduced | 2.771 |
| SRR8749031 | Uninduced | 0.353 |
| SRR8749032 | Uninduced | 15.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.981 |
| SRR8400027 | Control - Root | 1.459 |