Gene detail information of Glyur002309s00039177 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09050.1 | 1.00E-53 | |
| NR | XP_003604609.1 | 6.41E-114 | hypothetical protein MTR_4g015010 [Medicago truncatula] |
| trEMBL | tr|G7JLX3|G7JLX3_MEDTR | 2.00E-114 | Transmembrane protein, putative {ECO:0000313|EMBL:AES86806.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02309 | 14931 | 16901 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.338 |
| SRR1783600 | control | 5.244 |
| SRR1783602 | moderate drought stress | 4.704 |
| SRR1811619 | moderate drought stress | 4.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.951 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.939 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.333 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.462 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.589 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.639 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.600 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.818 |
| SRR2868004 | Drought Stress (root) | 4.911 |
| SRR2967015 | Control (root) | 5.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.215 |
| SRR9715740 | Leaf | 52.914 |
| SRR9715741 | Leaf | 26.308 |
| SRR9715739 | Root | 0.793 |
| SRR9715742 | Root | 3.444 |
| SRR9715743 | Root | 1.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.379 |
| SRR8749028 | MeJA induced 9h | 8.032 |
| SRR8749029 | MeJA induced 9h | 4.391 |
| SRR8749030 | Uninduced | 4.527 |
| SRR8749031 | Uninduced | 4.046 |
| SRR8749032 | Uninduced | 2.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.987 |
| SRR8400027 | Control - Root | 7.093 |