Gene detail

Gene detail information of Glyur002301s00034228

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G18010.2	5.00E-180	myo-inositol polyphosphate 5-phosphatase 2
NR	XP_007155752.1	0	hypothetical protein PHAVU_003G228700g [Phaseolus vulgaris]
Swissprot	tr\|Q9FUR2\|IP5P2_ARATH	0	Type I inositol 1,4,5-trisphosphate 5-phosphatase 2
trEMBL	tr\|V7CFT0\|V7CFT0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW27746.1}

Sequence

Transcript Sequence

>Glyur002301s00034228.1
TTCCTACTCGCTATGAATACTATTAATACATCAGTTTTGTTTTTTTGGTGCTGGCTCATTGATTTATTTCTATTAGAAATTGTTCTCTCTGATATGTTCTCTTGAAAGTGACATTTGTTGCTGACTTCCTTTTGGAGTATGTTTTCCTGTGTCTTATTATCAGAAAAAATTGGGTCATTGTGCTGTGAGGACCAGTAATATAATCTTCTTTACCTTCTGCAATTTGTGGCTGTGGATATCTTGCTGATCATATAGTCACTTTTATTTGGTTCTGTTAGGATCTCCCTTCCATTGTGCAATATTCAAATAACTCCAACTTTGTTTTGTTAATTGTTACAATCTGAGAAGACATGTTATTTAAATATTAAATGACAAACAGTGCCTANAAAATGTCAGTGTGACTGCTTCATATTTAAGAGCTTTAGCTTTGAAAGTATGGCACAGTGCAAAACANGTGCTTTTGGGGTTCAGTTATAGTATTTTTTGACCTGAAGCGATGAAAGCTAAGAGAGGAAGACGCTCAGAGGCCTTTTGGCCCTCCATAATGATGAAGAAATGGTTGAATATAAAGCAAAAGGNTTATGATTTTAGTGAAGATGAAGTGGACACTGAAACNGAGAGTGAAGATGATGATTCAAGAATGAGCGTGCATGAAGATAGTCCACTTGGAACACGGTTCATATTCCCAAGTCAAACATCAGATGCATCTCGTAAGGGCTACAAAATGAGACACAGAAGAGGAAAATCAGAAACTCTGCGGGTCCAGTACATAAATATGAAAGAAGTGAGGGTAACAATTGGCACTTGGAATGTTGCTGGAAGACTTCCATGTAATGATCTTGAAATTGAGGATTGGCTTTGTACCAAAGAACCAGCAGATATTTACATTATTGGTTTCCAAGAGGTAGTCCCATTGAATGCTGGAAATGTACTAGGAGCAGAGGATAATACACCCATCCCAAAATGGGAGGCAATCATTAGAAGAACTCTAAATAAGTCTTCTGAACCTGAGAGTAAACACAAAAGCTACAGNGCCCCTCCTTCTCCTGTTCTAAGAACTTCTGCATCCGCTGATGTTCTGGCAGACAATATAGATGTTAATAATCCACTAGATATGATGAATGATGGGGAGTATTTAGGAACTTTTGATCATAATGATGAGACAGAACATGAGAAAGAGAAAAGCATAATTGGTATAGGAAGGAATTTACAATTGAAGAGGATATATGGTCTTGATCATCATCAGACTATACTTGATTGGCCTGAACGTCCATTAGATGTAATCCCCCATGTTGATTCCACTCCAAAATTGCGGAGAGTACTAAGTAGCTCAGCTAGAATTGGCTTTAACTGGACAGATAATAATTCTTCAGTGTATGTTGGTGGAATGAAACGTTCACACCATAGTTCTGGGAACTTGGGTTTGTTCTGGAAAGAGCAGCAAGTGGTGCCTCATGTATTTGATTCCCTTGATGACATATCTGATGTGTTATCCGATGAGGAAGATGATACTTTTTCTGAATTACCAAATGACAAAGATGTTGACAATGGAATGGGTGGTGTGAAATCAAATACTAAGTATGTTCGGATTGTCAGTAAGCAGATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGGAGGCTGAGAAGGCATATTAATAATTTGAAAGTTTCTCCAGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGCATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCAGGTCAGAAGGATGGGGCAGAACAAAGACGAAACTCAGATGTTAATGAAATTCTACGACGCACTCGTTTCTCATCTGTTTTTGATGCAGATCAACCACAGACAATCCCATCTCACCATCAGATTTTCTGGTTTGGAGATTTGAATTATCGTATCAATATGTTGGATGTGGAGGTTCGAAAGTTGGTGACTCTAAAGAAATGGGATGAACTGATGAATTACGATCAGCTAAGCAATGAACTACGTAGTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAATTTAACTCTGATAAATATGTTGGTGAGAGCACAAGAGAAGGTGAAAAAAAGAGATCTCCAGCCTGGTGTGATCGTATATTGTGGCTGGGAAAAGGAATAAAGCAACTTCAGTATGGGTGTGGTGAAAATAAGCTCTCAGATCATCGACCAGTTAGTTCAATCTTCACAATTGATGTTGAAGTATTTGACCACCGCAAGTTACAACGAGCCCTGAATTTCACAAGTGCAACAGTTCATCCAGAGGCTTTCCTTCAAGAGGATGGGGACTTGTCCTATTAGATATATCCCAACCTTCTACAAACATTGTGTGGCACCTTGCAGTTTTAAACTGTTTAATATCTGTTAAACATCATCCAATTTTGATCTTCTCGGCTGTGTGTATAATCAGTTGTTTAATCTTTTGANGTACAAACTTTTTGTCACATTAGAACATTTCATATTCCATGTGGTATTCCTATAAGCTAATACTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02301	27813	33690	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0046856 phosphatidylinositol dephosphorylation

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002301s00034228.1	PF03372.18	Exo_endo_phos	357	580	4.20E-21
Glyur002301s00034228.2	PF03372.18	Exo_endo_phos	334	557	3.50E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.500
SRR1783600	control	0.526
SRR1783602	moderate drought stress	0.222
SRR1811619	moderate drought stress	0.220

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.084
DRR006520	Root Summer glycyrrhizin high producing strain	0.011
DRR006521	Root Winter glycyrrhizin high producing strain	0.621
DRR006522	Root Winter glycyrrhizin high producing strain	0.676
DRR006523	Root Summer glycyrrhizin low producing strain	0.344
DRR006524	Root Summer glycyrrhizin low producing strain	0.374
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.562
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.658

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.324
SRR2868004	Drought Stress (root)	53.181
SRR2967015	Control (root)	60.296

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.474
SRR9715740	Leaf	69.315
SRR9715741	Leaf	111.947
SRR9715739	Root	0.048
SRR9715742	Root	0.274
SRR9715743	Root	0.243

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.474
SRR8749028	MeJA induced 9h	70.343
SRR8749029	MeJA induced 9h	13.709
SRR8749030	Uninduced	213.144
SRR8749031	Uninduced	250.233
SRR8749032	Uninduced	83.448

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.231
SRR8400027	Control - Root	13.450