Gene detail information of Glyur002301s00034226 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32450.1 | 4.00E-106 | nitrate transporter 1.5 |
| NR | XP_003550941.1 | 1.30E-161 | PREDICTED: nitrate transporter 1.5-like [Glycine max] |
| COG | YP_004291222.1 | 5.00E-14 | amino acid/peptide transporter [Methanobacterium sp. AL-21] |
| Swissprot | tr|Q9LQL2|PTR14_ARATH | 2.00E-133 | Protein NRT1/ PTR FAMILY 7.3 |
| trEMBL | tr|I1MVD0|I1MVD0_SOYBN | 5.00E-162 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G16410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02301 | 10950 | 18677 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002301s00034226.1 | PF00854.16 | PTR2 | 80 | 277 | 1.90E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.221 |
| SRR1783600 | control | 14.398 |
| SRR1783602 | moderate drought stress | 18.610 |
| SRR1811619 | moderate drought stress | 17.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.859 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.345 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.369 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.454 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.974 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.974 |
| SRR2868004 | Drought Stress (root) | 100.310 |
| SRR2967015 | Control (root) | 66.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.593 |
| SRR9715740 | Leaf | 10.647 |
| SRR9715741 | Leaf | 17.775 |
| SRR9715739 | Root | 3.943 |
| SRR9715742 | Root | 16.524 |
| SRR9715743 | Root | 12.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.030 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.515 |
| SRR8400027 | Control - Root | 16.538 |