Gene detail information of Glyur002293s00025512 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20980.1 | 1.00E-97 | minichromosome maintenance 10 |
| NR | XP_003604042.1 | 0 | MCM10-like protein [Medicago truncatula] |
| trEMBL | tr|G7J8I4|G7J8I4_MEDTR | 0 | Minichromosome maintenance protein {ECO:0000313|EMBL:AES74293.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02293 | 18374 | 21724 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002293s00025512.1 | PF09329.6 | zf-primase | 239 | 284 | 1.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.919 |
| SRR1783600 | control | 3.778 |
| SRR1783602 | moderate drought stress | 1.512 |
| SRR1811619 | moderate drought stress | 1.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.065 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.050 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.957 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.970 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.217 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.802 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.533 |
| SRR2868004 | Drought Stress (root) | 6.608 |
| SRR2967015 | Control (root) | 5.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.667 |
| SRR9715740 | Leaf | 0.439 |
| SRR9715741 | Leaf | 0.553 |
| SRR9715739 | Root | 1.072 |
| SRR9715742 | Root | 0.922 |
| SRR9715743 | Root | 0.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.419 |
| SRR8749028 | MeJA induced 9h | 9.725 |
| SRR8749029 | MeJA induced 9h | 6.824 |
| SRR8749030 | Uninduced | 2.084 |
| SRR8749031 | Uninduced | 1.777 |
| SRR8749032 | Uninduced | 1.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.712 |
| SRR8400027 | Control - Root | 6.636 |