Gene detail information of Glyur002283s00035202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01810.3 | 9.00E-148 | |
| NR | XP_006604139.1 | 0 | PREDICTED: uncharacterized protein LOC100783487 isoform X2 [Glycine max] |
| trEMBL | tr|K7MXD2|K7MXD2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G25160.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02283 | 31932 | 39308 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002283s00035202.1 | PF10358.4 | NT-C2 | 13 | 126 | 7.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.893 |
| SRR1783600 | control | 23.273 |
| SRR1783602 | moderate drought stress | 31.474 |
| SRR1811619 | moderate drought stress | 31.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.416 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.279 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.247 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.036 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.417 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.976 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.927 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.816 |
| SRR2868004 | Drought Stress (root) | 12.394 |
| SRR2967015 | Control (root) | 16.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.308 |
| SRR9715740 | Leaf | 3.348 |
| SRR9715741 | Leaf | 3.647 |
| SRR9715739 | Root | 2.934 |
| SRR9715742 | Root | 29.306 |
| SRR9715743 | Root | 24.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.404 |
| SRR8749028 | MeJA induced 9h | 9.310 |
| SRR8749029 | MeJA induced 9h | 9.390 |
| SRR8749030 | Uninduced | 1.054 |
| SRR8749031 | Uninduced | 0.780 |
| SRR8749032 | Uninduced | 1.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.387 |
| SRR8400027 | Control - Root | 33.996 |