Gene detail information of Glyur002281s00047890 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48485.1 | 5.00E-15 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | AFK37599.1 | 1.62E-54 | unknown [Lotus japonicus] |
| Swissprot | tr|Q8W453|DIRL1_ARATH | 5.00E-19 | Putative lipid-transfer protein DIR1 (Precursor) |
| trEMBL | tr|I3SBF7|I3SBF7_LOTJA | 6.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:AFK37599.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02281 | 14675 | 14989 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002281s00047890.1 | PF14368.1 | LTP_2 | 13 | 104 | 2.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 111.810 |
| SRR1783600 | control | 115.946 |
| SRR1783602 | moderate drought stress | 195.161 |
| SRR1811619 | moderate drought stress | 194.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 275.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 275.005 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.895 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.274 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 185.631 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 184.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.797 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 420.024 |
| SRR2868004 | Drought Stress (root) | 294.136 |
| SRR2967015 | Control (root) | 254.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.596 |
| SRR9715740 | Leaf | 6.292 |
| SRR9715741 | Leaf | 1.022 |
| SRR9715739 | Root | 123.713 |
| SRR9715742 | Root | 198.679 |
| SRR9715743 | Root | 167.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 835.218 |
| SRR8400027 | Control - Root | 889.255 |