Gene detail information of Glyur002279s00040606 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21722.1 | 3.00E-31 | |
| NR | KHN47018.1 | 1.18E-110 | hypothetical protein glysoja_018385 [Glycine soja] |
| trEMBL | tr|K7KM70|K7KM70_SOYBN | 4.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G42821.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02279 | 34670 | 36716 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.667 |
| SRR1783600 | control | 0.543 |
| SRR1783602 | moderate drought stress | 0.773 |
| SRR1811619 | moderate drought stress | 0.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.399 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.644 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.761 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.284 |
| SRR2868004 | Drought Stress (root) | 0.292 |
| SRR2967015 | Control (root) | 0.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.075 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.472 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.094 |
| SRR9715743 | Root | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.626 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.061 |
| SRR8749030 | Uninduced | 0.197 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.516 |
| SRR8400027 | Control - Root | 0.643 |