Gene detail information of Glyur002277s00042145 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78130.1 | 0 | Major facilitator superfamily protein |
| NR | XP_003615076.1 | 0 | Quinolone resistance protein norA [Medicago truncatula] |
| COG | YP_008432702.1 | 1.00E-26 | hypothetical protein N186_06755 [Thermofilum sp. 1910b] |
| trEMBL | tr|G7KAD2|G7KAD2_MEDTR | 0 | MFS transporter {ECO:0000313|EMBL:AES98034.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02277 | 27063 | 30777 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002277s00042145.1 | PF07690.11 | MFS_1 | 19 | 384 | 1.60E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.145 |
| SRR1783600 | control | 5.040 |
| SRR1783602 | moderate drought stress | 3.998 |
| SRR1811619 | moderate drought stress | 4.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.397 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.930 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.705 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.092 |
| SRR2868004 | Drought Stress (root) | 22.364 |
| SRR2967015 | Control (root) | 17.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.213 |
| SRR9715740 | Leaf | 9.535 |
| SRR9715741 | Leaf | 17.439 |
| SRR9715739 | Root | 9.053 |
| SRR9715742 | Root | 8.814 |
| SRR9715743 | Root | 7.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.292 |
| SRR8749028 | MeJA induced 9h | 15.746 |
| SRR8749029 | MeJA induced 9h | 12.512 |
| SRR8749030 | Uninduced | 40.036 |
| SRR8749031 | Uninduced | 40.163 |
| SRR8749032 | Uninduced | 18.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.303 |
| SRR8400027 | Control - Root | 10.868 |