Gene detail information of Glyur002274s00042889 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AGV54791.1 | 4.12E-27 | hypothetical protein [Phaseolus vulgaris] |
| trEMBL | tr|T2DMV5|T2DMV5_PHAVU | 2.00E-27 | Uncharacterized protein {ECO:0000313|EMBL:AGV54791.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02274 | 11184 | 11798 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 295.013 |
| SRR1783600 | control | 301.607 |
| SRR1783602 | moderate drought stress | 316.213 |
| SRR1811619 | moderate drought stress | 324.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 145.741 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 108.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 137.524 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 110.867 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 133.893 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 124.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 281.852 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 261.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.052 |
| SRR2868004 | Drought Stress (root) | 0.836 |
| SRR2967015 | Control (root) | 0.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.545 |
| SRR9715740 | Leaf | 5.555 |
| SRR9715741 | Leaf | 5.725 |
| SRR9715739 | Root | 8.573 |
| SRR9715742 | Root | 13.933 |
| SRR9715743 | Root | 16.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.331 |
| SRR8749028 | MeJA induced 9h | 1.121 |
| SRR8749029 | MeJA induced 9h | 1.075 |
| SRR8749030 | Uninduced | 2.359 |
| SRR8749031 | Uninduced | 0.603 |
| SRR8749032 | Uninduced | 5.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.321 |
| SRR8400027 | Control - Root | 0.376 |