Gene detail information of Glyur002269s00032419 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29330.1 | 2.00E-61 | DERLIN-1 |
| NR | KHN42778.1 | 3.78E-149 | Derlin-1 [Glycine soja] |
| Swissprot | tr|Q8VZU9|DERL1_ARATH | 3.00E-82 | Derlin-1 |
| trEMBL | tr|I1KFR3|I1KFR3_SOYBN | 3.00E-149 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G47560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02269 | 1553 | 4199 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002269s00032419.1 | PF04511.10 | DER1 | 19 | 171 | 9.20E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.157 |
| SRR1783600 | control | 0.226 |
| SRR1783602 | moderate drought stress | 0.097 |
| SRR1811619 | moderate drought stress | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.616 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.516 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.887 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.856 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.582 |
| SRR2868004 | Drought Stress (root) | 5.314 |
| SRR2967015 | Control (root) | 2.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.631 |
| SRR9715740 | Leaf | 47.414 |
| SRR9715741 | Leaf | 42.328 |
| SRR9715739 | Root | 2.290 |
| SRR9715742 | Root | 2.132 |
| SRR9715743 | Root | 3.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.082 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.049 |
| SRR8749030 | Uninduced | 0.073 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.947 |
| SRR8400027 | Control - Root | 0.639 |