Gene detail information of Glyur002266s00040300.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18250.1 | 2.00E-101 | receptor serine/threonine kinase, putative |
| NR | XP_006605918.1 | 0 | PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X2 [Glycine max] |
| COG | YP_001958461.1 | 8.00E-24 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|Q3ECH2|Y1670_ARATH | 6.00E-118 | Probable receptor-like protein kinase At1g67000 (Precursor) |
| trEMBL | tr|K7N2Z1|K7N2Z1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G25291.2} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02266 | 21596 | 22561 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.9.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002266s00040300.1 | PF00069.20 | Pkinase | 11 | 281 | 2.80E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.718 |
| SRR1783600 | control | 0.720 |
| SRR1783602 | moderate drought stress | 1.101 |
| SRR1811619 | moderate drought stress | 1.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.567 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.564 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.915 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.801 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.191 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.529 |
| SRR2868004 | Drought Stress (root) | 1.723 |
| SRR2967015 | Control (root) | 1.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.500 |
| SRR9715740 | Leaf | 0.629 |
| SRR9715741 | Leaf | 5.546 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.658 |
| SRR9715743 | Root | 1.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.686 |
| SRR8749028 | MeJA induced 9h | 10.351 |
| SRR8749029 | MeJA induced 9h | 10.605 |
| SRR8749030 | Uninduced | 10.606 |
| SRR8749031 | Uninduced | 16.390 |
| SRR8749032 | Uninduced | 8.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.422 |
| SRR8400027 | Control - Root | 0.185 |