Gene detail information of Glyur002262s00035132 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003546339.1 | 3.13E-16 | PREDICTED: extensin-like [Glycine max] |
| trEMBL | tr|I1MGI8|I1MGI8_SOYBN | 1.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02262 | 28081 | 28563 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.177 |
| SRR1783600 | control | 37.755 |
| SRR1783602 | moderate drought stress | 33.421 |
| SRR1811619 | moderate drought stress | 25.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.661 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.391 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.496 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.909 |
| SRR2868004 | Drought Stress (root) | 8.996 |
| SRR2967015 | Control (root) | 21.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.175 |
| SRR9715740 | Leaf | 7.228 |
| SRR9715741 | Leaf | 13.639 |
| SRR9715739 | Root | 229.411 |
| SRR9715742 | Root | 109.538 |
| SRR9715743 | Root | 164.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.682 |
| SRR8749028 | MeJA induced 9h | 5.026 |
| SRR8749029 | MeJA induced 9h | 6.237 |
| SRR8749030 | Uninduced | 2.052 |
| SRR8749031 | Uninduced | 0.086 |
| SRR8749032 | Uninduced | 4.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.508 |
| SRR8400027 | Control - Root | 38.494 |