Gene detail information of Glyur002262s00035128 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49320.1 | 4.00E-76 | Protein of unknown function (DUF1218) |
| NR | ACU23754.1 | 5.37E-166 | unknown [Glycine max] |
| trEMBL | tr|C6TLG2|C6TLG2_SOYBN | 2.00E-166 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23754.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02262 | 17091 | 19042 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002262s00035128.1 | PF06749.7 | DUF1218 | 90 | 192 | 6.00E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.620 |
| SRR1783600 | control | 0.617 |
| SRR1783602 | moderate drought stress | 0.715 |
| SRR1811619 | moderate drought stress | 0.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.124 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.138 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.026 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.745 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.674 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.880 |
| SRR2868004 | Drought Stress (root) | 21.301 |
| SRR2967015 | Control (root) | 10.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.752 |
| SRR9715740 | Leaf | 23.135 |
| SRR9715741 | Leaf | 48.512 |
| SRR9715739 | Root | 0.564 |
| SRR9715742 | Root | 2.164 |
| SRR9715743 | Root | 1.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.586 |
| SRR8400027 | Control - Root | 2.404 |