Gene detail information of Glyur002260s00045616 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08290.2 | 1.00E-65 | nodulin MtN21 /EamA-like transporter family protein |
| NR | AFK35983.1 | 3.07E-123 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9SUF1|WTR31_ARATH | 2.00E-88 | WAT1-related protein At4g08290 |
| trEMBL | tr|I3S6U1|I3S6U1_LOTJA | 1.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:AFK35983.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02260 | 42455 | 44802 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002260s00045616.1 | PF00892.15 | EamA | 30 | 159 | 5.50E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.768 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.578 |
| SRR2868004 | Drought Stress (root) | 25.356 |
| SRR2967015 | Control (root) | 24.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.591 |
| SRR9715740 | Leaf | 5.971 |
| SRR9715741 | Leaf | 22.666 |
| SRR9715739 | Root | 0.022 |
| SRR9715742 | Root | 0.026 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.313 |
| SRR8400027 | Control - Root | 1.093 |