Gene detail information of Glyur002259s00033467 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10000.2 | 4.00E-39 | Thioredoxin family protein |
| NR | XP_003523476.1 | 1.57E-64 | PREDICTED: uncharacterized protein LOC100780985 isoform X1 [Glycine max] |
| COG | YP_001084649.1 | 8.00E-11 | hypothetical protein A1S_1620 [Acinetobacter baumannii ATCC 17978] |
| trEMBL | tr|K7KMB0|K7KMB0_SOYBN | 1.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G43520.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02259 | 4 | 8124 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.842 |
| SRR1783600 | control | 10.110 |
| SRR1783602 | moderate drought stress | 12.969 |
| SRR1811619 | moderate drought stress | 12.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.446 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.849 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.937 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.615 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.321 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.293 |
| SRR2868004 | Drought Stress (root) | 5.733 |
| SRR2967015 | Control (root) | 6.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.941 |
| SRR9715740 | Leaf | 18.251 |
| SRR9715741 | Leaf | 8.333 |
| SRR9715739 | Root | 1.895 |
| SRR9715742 | Root | 2.708 |
| SRR9715743 | Root | 3.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.173 |
| SRR8749028 | MeJA induced 9h | 1.338 |
| SRR8749029 | MeJA induced 9h | 1.517 |
| SRR8749030 | Uninduced | 1.544 |
| SRR8749031 | Uninduced | 1.750 |
| SRR8749032 | Uninduced | 0.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.594 |
| SRR8400027 | Control - Root | 15.218 |