Gene detail information of Glyur002258s00044142 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004488505.1 | 3.50E-115 | PREDICTED: uncharacterized protein LOC101488681 [Cicer arietinum] |
| trEMBL | tr|A0A072TGZ8|A0A072TGZ8_MEDTR | 2.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:KEH16652.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02258 | 32841 | 36149 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002258s00044142.1 | PF03004.9 | Transposase_24 | 124 | 255 | 3.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.139 |
| SRR1783600 | control | 1.053 |
| SRR1783602 | moderate drought stress | 0.714 |
| SRR1811619 | moderate drought stress | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.457 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.092 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.047 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.044 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.817 |
| SRR2868004 | Drought Stress (root) | 5.434 |
| SRR2967015 | Control (root) | 6.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.121 |
| SRR9715740 | Leaf | 3.116 |
| SRR9715741 | Leaf | 2.061 |
| SRR9715739 | Root | 0.339 |
| SRR9715742 | Root | 0.726 |
| SRR9715743 | Root | 0.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.021 |
| SRR8749028 | MeJA induced 9h | 8.274 |
| SRR8749029 | MeJA induced 9h | 13.212 |
| SRR8749030 | Uninduced | 7.912 |
| SRR8749031 | Uninduced | 7.572 |
| SRR8749032 | Uninduced | 7.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.035 |
| SRR8400027 | Control - Root | 6.837 |