Gene detail information of Glyur002257s00039813 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU14447.1 | 5.87E-08 | unknown [Glycine max] |
| trEMBL | tr|C6SYX4|C6SYX4_SOYBN | 2.00E-08 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14447.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02257 | 22445 | 30437 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.750 |
| SRR1783600 | control | 0.725 |
| SRR1783602 | moderate drought stress | 5.045 |
| SRR1811619 | moderate drought stress | 4.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.256 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.592 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 57.512 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.936 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.870 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.278 |
| SRR2868004 | Drought Stress (root) | 0.096 |
| SRR2967015 | Control (root) | 0.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.074 |
| SRR9715740 | Leaf | 0.301 |
| SRR9715741 | Leaf | 0.095 |
| SRR9715739 | Root | 0.149 |
| SRR9715742 | Root | 0.080 |
| SRR9715743 | Root | 0.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.271 |
| SRR8749028 | MeJA induced 9h | 0.240 |
| SRR8749029 | MeJA induced 9h | 0.138 |
| SRR8749030 | Uninduced | 0.041 |
| SRR8749031 | Uninduced | 0.250 |
| SRR8749032 | Uninduced | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.302 |
| SRR8400027 | Control - Root | 1.010 |