Gene detail information of Glyur002248s00043281 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007133131.1 | 3.88E-77 | hypothetical protein PHAVU_011G154100g [Phaseolus vulgaris] |
| Swissprot | tr|G7J032|PHBP_MEDTR | 5.00E-63 | Phytohormone-binding protein |
| trEMBL | tr|V7AIP4|V7AIP4_PHAVU | 1.00E-77 | Uncharacterized protein {ECO:0000313|EMBL:ESW05125.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02248 | 27343 | 28116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002248s00043281.1 | PF00407.14 | Bet_v_1 | 10 | 151 | 9.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.039 |
| SRR1783602 | moderate drought stress | 0.184 |
| SRR1811619 | moderate drought stress | 0.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.926 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.394 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.595 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.476 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.330 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.393 |
| SRR2868004 | Drought Stress (root) | 8.480 |
| SRR2967015 | Control (root) | 3.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.099 |
| SRR9715740 | Leaf | 0.577 |
| SRR9715741 | Leaf | 22.083 |
| SRR9715739 | Root | 0.097 |
| SRR9715742 | Root | 0.815 |
| SRR9715743 | Root | 1.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.108 |
| SRR8749031 | Uninduced | 0.086 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.784 |
| SRR8400027 | Control - Root | 2.673 |