Gene detail information of Glyur002243s00038747 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57540.1 | 9.00E-42 | Remorin family protein |
| NR | XP_007162237.1 | 2.21E-116 | hypothetical protein PHAVU_001G135500g [Phaseolus vulgaris] |
| Swissprot | tr|P93788|REMO_SOLTU | 2.00E-12 | Remorin |
| trEMBL | tr|I1N920|I1N920_SOYBN | 9.00E-118 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G32280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02243 | 30910 | 33930 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002243s00038747.1 | PF03763.8 | Remorin_C | 184 | 292 | 1.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.884 |
| SRR1783600 | control | 41.434 |
| SRR1783602 | moderate drought stress | 44.508 |
| SRR1811619 | moderate drought stress | 43.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.685 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.977 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.697 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.776 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.533 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.345 |
| SRR2868004 | Drought Stress (root) | 27.200 |
| SRR2967015 | Control (root) | 19.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.743 |
| SRR9715740 | Leaf | 32.003 |
| SRR9715741 | Leaf | 31.450 |
| SRR9715739 | Root | 7.424 |
| SRR9715742 | Root | 28.848 |
| SRR9715743 | Root | 21.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.886 |
| SRR8749028 | MeJA induced 9h | 2.660 |
| SRR8749029 | MeJA induced 9h | 0.877 |
| SRR8749030 | Uninduced | 0.200 |
| SRR8749031 | Uninduced | 0.022 |
| SRR8749032 | Uninduced | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 57.024 |
| SRR8400027 | Control - Root | 44.908 |