Gene detail

Gene detail information of Glyur002240s00040736.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G31550.2	3.00E-53	WRKY DNA-binding protein 11
NR	XP_004488023.1	8.69E-133	PREDICTED: probable WRKY transcription factor 11-like [Cicer arietinum]
Swissprot	tr\|Q9SV15\|WRK11_ARATH	3.00E-93	Probable WRKY transcription factor 11
trEMBL	tr\|I1L1G0\|I1L1G0_SOYBN	3.00E-115	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G06980.1}

Sequence

Transcript Sequence

>Glyur002240s00040736.1
CTCCTCTTTTATAACCCCACTTCCCATTCTCCAAAACCAAAACCCCCCCTCACCCTCCTCTGTGTGAATTAAATGGCTATAGATGCAATTGGTGTTCCCCAAATCAAGATGGAAGAACAAATGGCTATTAGTACAATACAAGAAGCTGCTTCAGCTGGGTTAAAAAGCATGGAGCATCTCCTTCTACTCCTCTCTTCTTCTTCTTCTTACAATTCTTCTTCCTCAACTCACAACAACAACAACCTTGATTGCTCCGAAATCACCGACTTCACCGTTTCCAAGTTCAAACAAGTNATCAACCTCTTAAACCGCACCGGCCACGCCCGTTTCCGCCGTGCACCACCNCCCCAAAATCCCAAACCACAACAACAACCTCAGATTCATGAGTTCACTCTAGATTTCGTCAAACCCAACAACAAATTAGACGAAACTGATCTCTCTATCTCCACCACCAACACAAACTCCTCCTTCTTGTCCTCCATCACCGCCGACGCTAGCGTCTCCGACGGCAAGATTGGACCCTTCTTAACACCCTCCGCCACCGCCAAGCTCCCTCTCTCCTCCTCTCACCGGAAAAGGTGTCACGACGCCGCACCCTCCTCTTCCTCCCCCTGCCACTGCTCCAAGAAAAGGAAAACACGAGTGAAACGAACGATCCGCGTGCCGGCGATTAGTTCGAAAATCGCCGATATCCCACCGGATGAGTACACATGGAGGAAATACGGTCAAAAACCGATCAAGGGTTCACCCTACCCTCGTGGGTACTACAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGAGCACGTGATGATCCTAACATGATGATTGTCACGTACGAGGGCGACCACCGTCATTCTCAGCCGTTAATCACCGCTTCCGCCGTCGGTTTTGCCCTCCAATCAGTTGAATCAAGCAACGGAGGTTACGGAGCCGTTTGGAAAGCTCACGGTGGCAAACGTTGAAGTGGTCCGTCAGANCGTCACGGTGACGGCGTCAAAACCGAGGCGTTGAAAGTTGAAAGGCGAAAAAAGCAATGAAAGNAAGTCAAGTTTCGCATCGTAGACTTTTGACTGAGTCGTTGAAAAACTTTAATGAGGGACTTTTGTGTAAATTTGACCCGAAAAAAATGCAGCAGGTCTCAAAATGAAATGTTGTAGCTTTTTATTTTAAGAAGAAAAAATTGGTATGGGGAAATTCCATATTTCCTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02240	43814	45538	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002240s00040736.1	PF10533.4	Plant_zn_clust	167	206	4.20E-16
Glyur002240s00040736.1	PF03106.10	WRKY	210	267	9.00E-29

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	75.947
SRR1783600	control	75.498
SRR1783602	moderate drought stress	56.870
SRR1811619	moderate drought stress	54.906

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	45.857
DRR006520	Root Summer glycyrrhizin high producing strain	45.840
DRR006521	Root Winter glycyrrhizin high producing strain	9.195
DRR006522	Root Winter glycyrrhizin high producing strain	8.965
DRR006523	Root Summer glycyrrhizin low producing strain	100.398
DRR006524	Root Summer glycyrrhizin low producing strain	100.176
DRR006525	Leaf Summer glycyrrhizin high producing strain	32.134
DRR006526	Leaf Summer glycyrrhizin high producing strain	33.042

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	79.735
SRR2868004	Drought Stress (root)	137.713
SRR2967015	Control (root)	162.402

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	113.279
SRR9715740	Leaf	108.157
SRR9715741	Leaf	138.275
SRR9715739	Root	118.937
SRR9715742	Root	159.408
SRR9715743	Root	150.850

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	204.075
SRR8749028	MeJA induced 9h	100.276
SRR8749029	MeJA induced 9h	95.177
SRR8749030	Uninduced	162.920
SRR8749031	Uninduced	250.923
SRR8749032	Uninduced	166.218

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	121.021
SRR8400027	Control - Root	120.056