Gene detail information of Glyur002234s00041722 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60720.1 | 5.00E-72 | plasmodesmata-located protein 8 |
| NR | XP_006591255.1 | 1.15E-138 | PREDICTED: cysteine-rich repeat secretory protein 15-like isoform X1 [Glycine max] |
| Swissprot | tr|Q6NKQ9|CRR15_ARATH | 4.00E-98 | Cysteine-rich repeat secretory protein 15 (Precursor) |
| trEMBL | tr|K7LR32|K7LR32_SOYBN | 4.00E-139 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G30155.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02234 | 22080 | 22895 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002234s00041722.1 | PF01657.12 | Stress-antifung | 50 | 150 | 1.50E-22 |
| Glyur002234s00041722.1 | PF01657.12 | Stress-antifung | 165 | 250 | 1.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.513 |
| SRR1783600 | control | 2.888 |
| SRR1783602 | moderate drought stress | 2.141 |
| SRR1811619 | moderate drought stress | 2.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.408 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.492 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.394 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.942 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.766 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.283 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.172 |
| SRR2868004 | Drought Stress (root) | 10.183 |
| SRR2967015 | Control (root) | 11.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.406 |
| SRR9715740 | Leaf | 1.810 |
| SRR9715741 | Leaf | 2.162 |
| SRR9715739 | Root | 0.264 |
| SRR9715742 | Root | 3.190 |
| SRR9715743 | Root | 1.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.302 |
| SRR8749028 | MeJA induced 9h | 0.315 |
| SRR8749029 | MeJA induced 9h | 1.451 |
| SRR8749030 | Uninduced | 0.135 |
| SRR8749031 | Uninduced | 0.712 |
| SRR8749032 | Uninduced | 2.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.974 |
| SRR8400027 | Control - Root | 4.535 |