Gene detail information of Glyur002224s00035118 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55760.3 | 2.00E-166 | |
| NR | KEH41044.1 | 0 | hypothetical protein MTR_1g041275 [Medicago truncatula] |
| trEMBL | tr|A0A072VG87|A0A072VG87_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH41044.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02224 | 5138 | 9248 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 97.384 |
| SRR1783600 | control | 98.057 |
| SRR1783602 | moderate drought stress | 122.165 |
| SRR1811619 | moderate drought stress | 121.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 66.507 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.853 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.028 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.717 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.958 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 41.638 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 90.032 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 89.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.772 |
| SRR2868004 | Drought Stress (root) | 9.978 |
| SRR2967015 | Control (root) | 11.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.058 |
| SRR9715740 | Leaf | 51.094 |
| SRR9715741 | Leaf | 22.788 |
| SRR9715739 | Root | 34.096 |
| SRR9715742 | Root | 68.266 |
| SRR9715743 | Root | 63.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.040 |
| SRR8749028 | MeJA induced 9h | 4.878 |
| SRR8749029 | MeJA induced 9h | 6.872 |
| SRR8749030 | Uninduced | 1.739 |
| SRR8749031 | Uninduced | 0.541 |
| SRR8749032 | Uninduced | 1.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 69.852 |
| SRR8400027 | Control - Root | 66.054 |