Gene detail

Gene detail information of Glyur002221s00037513

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64200.1	2.00E-40	vacuolar H+-ATPase subunit E isoform 3
NR	XP_004503647.1	2.51E-67	PREDICTED: V-type proton ATPase subunit E-like [Cicer arietinum]
Swissprot	tr\|Q9MB46\|VATE_CITUN	3.00E-59	V-type proton ATPase subunit E
trEMBL	tr\|I1K6B7\|I1K6B7_SOYBN	2.00E-67	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G37150.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02221	42754	44973	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0015991 ATP hydrolysis coupled proton transport

cellular_component
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain

molecular_function
GO:0046961 proton-transporting ATPase activity, rotational mechanism

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002221s00037513.1	PF01991.13	vATP-synt_E	9	117	2.50E-34

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	37.255
SRR1783600	control	37.371
SRR1783602	moderate drought stress	11.017
SRR1811619	moderate drought stress	11.379

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	19.668
DRR006520	Root Summer glycyrrhizin high producing strain	20.111
DRR006521	Root Winter glycyrrhizin high producing strain	3.475
DRR006522	Root Winter glycyrrhizin high producing strain	3.171
DRR006523	Root Summer glycyrrhizin low producing strain	9.888
DRR006524	Root Summer glycyrrhizin low producing strain	10.091
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.101
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.238

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	49.562
SRR2868004	Drought Stress (root)	24.613
SRR2967015	Control (root)	22.570

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.590
SRR9715740	Leaf	15.069
SRR9715741	Leaf	9.325
SRR9715739	Root	9.795
SRR9715742	Root	7.342
SRR9715743	Root	10.084

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.825
SRR8749028	MeJA induced 9h	15.879
SRR8749029	MeJA induced 9h	32.344
SRR8749030	Uninduced	2.535
SRR8749031	Uninduced	1.516
SRR8749032	Uninduced	3.675

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	24.448
SRR8400027	Control - Root	28.900