Gene detail information of Glyur002221s00037512 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23740.1 | 1.00E-63 | Leucine-rich repeat protein kinase family protein |
| NR | XP_007160136.1 | 1.42E-116 | hypothetical protein PHAVU_002G295600g [Phaseolus vulgaris] |
| COG | YP_002433868.1 | 2.00E-17 | hypothetical protein Dalk_4722 [Desulfatibacillum alkenivorans AK-01] |
| Swissprot | tr|Q9SUQ3|Y4374_ARATH | 6.00E-79 | Probable inactive receptor kinase At4g23740 (Precursor) |
| trEMBL | tr|V7CS96|V7CS96_PHAVU | 5.00E-117 | Uncharacterized protein {ECO:0000313|EMBL:ESW32130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02221 | 39724 | 40519 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002221s00037512.1 | PF08263.7 | LRRNT_2 | 31 | 67 | 9.70E-09 |
| Glyur002221s00037512.1 | PF12799.2 | LRR_4 | 98 | 144 | 1.10E-06 |
| Glyur002221s00037512.1 | PF00560.28 | LRR_1 | 190 | 211 | 0.016 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.747 |
| SRR1783600 | control | 1.633 |
| SRR1783602 | moderate drought stress | 0.996 |
| SRR1811619 | moderate drought stress | 1.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.213 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.344 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.713 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.631 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.638 |
| SRR2868004 | Drought Stress (root) | 2.922 |
| SRR2967015 | Control (root) | 3.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.261 |
| SRR9715740 | Leaf | 4.059 |
| SRR9715741 | Leaf | 1.393 |
| SRR9715739 | Root | 0.989 |
| SRR9715742 | Root | 3.265 |
| SRR9715743 | Root | 2.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.526 |
| SRR8749028 | MeJA induced 9h | 0.434 |
| SRR8749029 | MeJA induced 9h | 0.157 |
| SRR8749030 | Uninduced | 0.015 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.234 |
| SRR8400027 | Control - Root | 4.183 |