Gene detail information of Glyur002221s00037509 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23720.1 | 4.00E-55 | Protein of unknown function (DUF1191) |
| NR | XP_003524445.1 | 2.37E-180 | PREDICTED: uncharacterized protein LOC100815056 [Glycine max] |
| trEMBL | tr|I1K6C0|I1K6C0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G37180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02221 | 21807 | 22679 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002221s00037509.1 | PF06697.7 | DUF1191 | 25 | 283 | 4.40E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.871 |
| SRR1783600 | control | 10.503 |
| SRR1783602 | moderate drought stress | 2.577 |
| SRR1811619 | moderate drought stress | 2.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.631 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.953 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.929 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.884 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.352 |
| SRR2868004 | Drought Stress (root) | 3.732 |
| SRR2967015 | Control (root) | 4.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.311 |
| SRR9715740 | Leaf | 0.232 |
| SRR9715741 | Leaf | 0.143 |
| SRR9715739 | Root | 6.168 |
| SRR9715742 | Root | 1.596 |
| SRR9715743 | Root | 1.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.936 |
| SRR8749028 | MeJA induced 9h | 0.755 |
| SRR8749029 | MeJA induced 9h | 1.951 |
| SRR8749030 | Uninduced | 0.899 |
| SRR8749031 | Uninduced | 1.936 |
| SRR8749032 | Uninduced | 4.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.393 |
| SRR8400027 | Control - Root | 10.430 |