Gene detail information of Glyur002221s00037506 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64160.1 | 2.00E-45 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_011073507.1 | 3.91E-65 | PREDICTED: dirigent protein 5-like [Sesamum indicum] |
| Swissprot | tr|Q9SH66|DIR5_ARATH | 2.00E-56 | Dirigent protein 5 (Precursor) |
| trEMBL | tr|U7DY57|U7DY57_POPTR | 9.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:ERP46483.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02221 | 990 | 1382 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002221s00037506.1 | PF03018.9 | Dirigent | 8 | 126 | 1.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.050 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.690 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.547 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.365 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.750 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.104 |
| SRR2868004 | Drought Stress (root) | 1.445 |
| SRR2967015 | Control (root) | 0.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.193 |
| SRR9715740 | Leaf | 42.245 |
| SRR9715741 | Leaf | 71.585 |
| SRR9715739 | Root | 0.191 |
| SRR9715742 | Root | 9.955 |
| SRR9715743 | Root | 11.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.270 |
| SRR8749029 | MeJA induced 9h | 0.243 |
| SRR8749030 | Uninduced | 4.780 |
| SRR8749031 | Uninduced | 1.143 |
| SRR8749032 | Uninduced | 4.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.788 |
| SRR8400027 | Control - Root | 13.490 |