Gene detail information of Glyur002220s00035923 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49645.1 | 3.00E-34 | |
| NR | XP_006606143.1 | 6.67E-99 | PREDICTED: uncharacterized protein LOC100801714 isoform X2 [Glycine max] |
| trEMBL | tr|K7N3T7|K7N3T7_SOYBN | 2.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30190.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02220 | 34115 | 36795 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.284 |
| SRR1783600 | control | 8.875 |
| SRR1783602 | moderate drought stress | 8.890 |
| SRR1811619 | moderate drought stress | 10.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.857 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.377 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.191 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.228 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.304 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.278 |
| SRR2868004 | Drought Stress (root) | 22.188 |
| SRR2967015 | Control (root) | 21.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.267 |
| SRR9715740 | Leaf | 19.690 |
| SRR9715741 | Leaf | 28.200 |
| SRR9715739 | Root | 1.436 |
| SRR9715742 | Root | 8.388 |
| SRR9715743 | Root | 8.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.132 |
| SRR8749028 | MeJA induced 9h | 21.006 |
| SRR8749029 | MeJA induced 9h | 19.485 |
| SRR8749030 | Uninduced | 23.100 |
| SRR8749031 | Uninduced | 15.326 |
| SRR8749032 | Uninduced | 15.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.680 |
| SRR8400027 | Control - Root | 24.303 |