Gene detail information of Glyur002215s00039149 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44760.1 | 1.00E-50 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| NR | XP_003544684.1 | 2.67E-112 | PREDICTED: uncharacterized protein LOC100816511 [Glycine max] |
| trEMBL | tr|I1MA31|I1MA31_SOYBN | 1.00E-112 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G23560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02215 | 38938 | 41012 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002215s00039149.1 | PF00582.21 | Usp | 70 | 205 | 2.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.178 |
| SRR1783600 | control | 0.161 |
| SRR1783602 | moderate drought stress | 0.385 |
| SRR1811619 | moderate drought stress | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.599 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.118 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.278 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.677 |
| SRR2868004 | Drought Stress (root) | 1.920 |
| SRR2967015 | Control (root) | 1.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.574 |
| SRR9715740 | Leaf | 7.411 |
| SRR9715741 | Leaf | 2.135 |
| SRR9715739 | Root | 0.108 |
| SRR9715742 | Root | 0.460 |
| SRR9715743 | Root | 0.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.096 |
| SRR8749028 | MeJA induced 9h | 0.049 |
| SRR8749029 | MeJA induced 9h | 0.073 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.936 |
| SRR8400027 | Control - Root | 3.288 |