Gene detail information of Glyur002215s00039148 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77610.1 | 1.00E-167 | EamA-like transporter family protein |
| NR | XP_003542929.1 | 0 | PREDICTED: UDP-galactose transporter 1 [Glycine max] |
| Swissprot | tr|Q9C521|UGAL1_ARATH | 0 | UDP-galactose transporter 1 |
| trEMBL | tr|I1MA32|I1MA32_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G23570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02215 | 29586 | 38183 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002215s00039148.1 | PF00892.15 | EamA | 29 | 151 | 3.60E-08 |
| Glyur002215s00039148.1 | PF03151.11 | TPT | 161 | 303 | 3.60E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.899 |
| SRR1783600 | control | 15.956 |
| SRR1783602 | moderate drought stress | 18.698 |
| SRR1811619 | moderate drought stress | 18.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.958 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 93.806 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 91.404 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.438 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.700 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.860 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.296 |
| SRR2868004 | Drought Stress (root) | 47.971 |
| SRR2967015 | Control (root) | 47.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.541 |
| SRR9715740 | Leaf | 53.456 |
| SRR9715741 | Leaf | 39.357 |
| SRR9715739 | Root | 34.951 |
| SRR9715742 | Root | 23.265 |
| SRR9715743 | Root | 28.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 71.910 |
| SRR8749028 | MeJA induced 9h | 94.607 |
| SRR8749029 | MeJA induced 9h | 71.058 |
| SRR8749030 | Uninduced | 53.866 |
| SRR8749031 | Uninduced | 39.399 |
| SRR8749032 | Uninduced | 52.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.372 |
| SRR8400027 | Control - Root | 52.732 |