Gene detail information of Glyur002213s00037358 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27290.2 | 4.00E-32 | |
| NR | XP_004504401.1 | 1.37E-66 | PREDICTED: uncharacterized protein LOC101504516 [Cicer arietinum] |
| trEMBL | tr|G7LH97|G7LH97_MEDTR | 3.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:AFK37272.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02213 | 15144 | 18444 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.213 |
| SRR1783600 | control | 10.255 |
| SRR1783602 | moderate drought stress | 12.262 |
| SRR1811619 | moderate drought stress | 11.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.462 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.752 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.393 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.338 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.236 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.791 |
| SRR2868004 | Drought Stress (root) | 39.626 |
| SRR2967015 | Control (root) | 39.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 63.778 |
| SRR9715740 | Leaf | 50.714 |
| SRR9715741 | Leaf | 70.519 |
| SRR9715739 | Root | 21.564 |
| SRR9715742 | Root | 31.492 |
| SRR9715743 | Root | 27.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.333 |
| SRR8749028 | MeJA induced 9h | 31.375 |
| SRR8749029 | MeJA induced 9h | 30.417 |
| SRR8749030 | Uninduced | 23.285 |
| SRR8749031 | Uninduced | 117.971 |
| SRR8749032 | Uninduced | 61.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.996 |
| SRR8400027 | Control - Root | 18.278 |