Gene detail information of Glyur002211s00040702 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69040.2 | 0 | ACT domain repeat 4 |
| NR | KHN29949.1 | 0 | [Protein-PII] uridylyltransferase [Glycine soja] |
| COG | YP_004011508.1 | 1.00E-08 | UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC 17100] |
| Swissprot | tr|Q8LJW3|ACR4_ARATH | 0 | ACT domain-containing protein ACR4 {ECO:0000305} |
| trEMBL | tr|I1JEJ6|I1JEJ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02211 | 6572 | 10616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002211s00040702.1 | PF01842.20 | ACT | 42 | 103 | 3.90E-09 |
| Glyur002211s00040702.1 | PF01842.20 | ACT | 130 | 184 | 4.10E-09 |
| Glyur002211s00040702.1 | PF01842.20 | ACT | 349 | 405 | 4.90E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.757 |
| SRR1783600 | control | 3.798 |
| SRR1783602 | moderate drought stress | 3.636 |
| SRR1811619 | moderate drought stress | 3.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.321 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.332 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.508 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.487 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.464 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.696 |
| SRR2868004 | Drought Stress (root) | 45.009 |
| SRR2967015 | Control (root) | 55.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.074 |
| SRR9715740 | Leaf | 14.607 |
| SRR9715741 | Leaf | 27.784 |
| SRR9715739 | Root | 5.290 |
| SRR9715742 | Root | 18.309 |
| SRR9715743 | Root | 14.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.688 |
| SRR8749028 | MeJA induced 9h | 30.414 |
| SRR8749029 | MeJA induced 9h | 30.791 |
| SRR8749030 | Uninduced | 23.236 |
| SRR8749031 | Uninduced | 16.787 |
| SRR8749032 | Uninduced | 17.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.445 |
| SRR8400027 | Control - Root | 22.214 |