Gene detail information of Glyur002204s00040644 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14470.1 | 4.00E-82 | NB-ARC domain-containing disease resistance protein |
| NR | KEH16240.1 | 0 | NB-ARC domain disease resistance protein, putative, partial [Medicago truncatula] |
| Swissprot | tr|Q9LRR4|R13L1_ARATH | 3.00E-95 | Putative disease resistance RPP13-like protein 1 |
| trEMBL | tr|A0A072TRQ2|A0A072TRQ2_MEDTR | 0 | NB-ARC domain disease resistance protein, putative {ECO:0000313|EMBL:KEH16240.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02204 | 36949 | 40891 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002204s00040644.1 | PF00931.17 | NB-ARC | 212 | 470 | 2.10E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.262 |
| SRR1783600 | control | 1.381 |
| SRR1783602 | moderate drought stress | 3.447 |
| SRR1811619 | moderate drought stress | 3.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.900 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.711 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.762 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.845 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.575 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.939 |
| SRR2868004 | Drought Stress (root) | 5.749 |
| SRR2967015 | Control (root) | 5.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.318 |
| SRR9715740 | Leaf | 2.149 |
| SRR9715741 | Leaf | 1.967 |
| SRR9715739 | Root | 0.578 |
| SRR9715742 | Root | 5.949 |
| SRR9715743 | Root | 5.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.895 |
| SRR8749028 | MeJA induced 9h | 2.548 |
| SRR8749029 | MeJA induced 9h | 1.997 |
| SRR8749030 | Uninduced | 2.719 |
| SRR8749031 | Uninduced | 0.989 |
| SRR8749032 | Uninduced | 0.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.098 |
| SRR8400027 | Control - Root | 10.735 |