Gene detail information of Glyur002204s00040641 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14470.1 | 4.00E-24 | NB-ARC domain-containing disease resistance protein |
| NR | XP_003598501.1 | 2.09E-90 | Resistance protein [Medicago truncatula] |
| Swissprot | tr|Q9LRR4|R13L1_ARATH | 3.00E-39 | Putative disease resistance RPP13-like protein 1 |
| trEMBL | tr|G7J0J1|G7J0J1_MEDTR | 8.00E-91 | LRR and NB-ARC domain disease resistance protein {ECO:0000313|EMBL:AES68752.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02204 | 9985 | 10614 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.364 |
| SRR1783600 | control | 1.867 |
| SRR1783602 | moderate drought stress | 3.080 |
| SRR1811619 | moderate drought stress | 3.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.515 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.536 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.210 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.751 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.292 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.443 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.413 |
| SRR2868004 | Drought Stress (root) | 5.712 |
| SRR2967015 | Control (root) | 4.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.210 |
| SRR9715740 | Leaf | 0.794 |
| SRR9715741 | Leaf | 0.620 |
| SRR9715739 | Root | 0.272 |
| SRR9715742 | Root | 0.780 |
| SRR9715743 | Root | 0.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.232 |
| SRR8749028 | MeJA induced 9h | 5.465 |
| SRR8749029 | MeJA induced 9h | 1.008 |
| SRR8749030 | Uninduced | 1.010 |
| SRR8749031 | Uninduced | 1.282 |
| SRR8749032 | Uninduced | 0.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.665 |
| SRR8400027 | Control - Root | 3.445 |