Gene detail information of Glyur002203s00035383 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56250.1 | 1.00E-06 | |
| NR | KHN44722.1 | 8.22E-50 | hypothetical protein glysoja_032061 [Glycine soja] |
| trEMBL | tr|I1M7N3|I1M7N3_SOYBN | 3.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G05860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02203 | 33102 | 36906 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.761 |
| SRR1783600 | control | 23.962 |
| SRR1783602 | moderate drought stress | 26.814 |
| SRR1811619 | moderate drought stress | 25.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.243 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.937 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.879 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.198 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.054 |
| SRR2868004 | Drought Stress (root) | 3.827 |
| SRR2967015 | Control (root) | 4.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.336 |
| SRR9715740 | Leaf | 3.147 |
| SRR9715741 | Leaf | 1.905 |
| SRR9715739 | Root | 3.689 |
| SRR9715742 | Root | 3.172 |
| SRR9715743 | Root | 4.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.809 |
| SRR8749028 | MeJA induced 9h | 6.795 |
| SRR8749029 | MeJA induced 9h | 8.245 |
| SRR8749030 | Uninduced | 2.066 |
| SRR8749031 | Uninduced | 2.176 |
| SRR8749032 | Uninduced | 1.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.786 |
| SRR8400027 | Control - Root | 4.017 |