Gene detail information of Glyur002203s00035378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40480.1 | 6.00E-82 | Plant protein of unknown function (DUF827) |
| NR | XP_004491051.1 | 0 | PREDICTED: WEB family protein At2g40480-like [Cicer arietinum] |
| Swissprot | tr|Q5XVC7|Y2048_ARATH | 9.00E-100 | WEB family protein At2g40480 |
| trEMBL | tr|K7KAT6|K7KAT6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G42696.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02203 | 4367 | 7493 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002203s00035378.1 | PF05701.6 | WEMBL | 35 | 115 | 4.00E-11 |
| Glyur002203s00035378.1 | PF05701.6 | WEMBL | 166 | 394 | 6.80E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.949 |
| SRR1783600 | control | 10.986 |
| SRR1783602 | moderate drought stress | 8.278 |
| SRR1811619 | moderate drought stress | 8.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.391 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.209 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.134 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.080 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.043 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.277 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.193 |
| SRR2868004 | Drought Stress (root) | 32.354 |
| SRR2967015 | Control (root) | 35.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.760 |
| SRR9715740 | Leaf | 4.473 |
| SRR9715741 | Leaf | 5.410 |
| SRR9715739 | Root | 1.859 |
| SRR9715742 | Root | 7.174 |
| SRR9715743 | Root | 6.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.145 |
| SRR8749028 | MeJA induced 9h | 33.747 |
| SRR8749029 | MeJA induced 9h | 23.546 |
| SRR8749030 | Uninduced | 18.768 |
| SRR8749031 | Uninduced | 14.002 |
| SRR8749032 | Uninduced | 13.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.964 |
| SRR8400027 | Control - Root | 59.093 |