Gene detail

Gene detail information of Glyur002202s00037347

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G46330.1	2.00E-10	Leucine-rich receptor-like protein kinase family protein
NR	XP_006647067.1	5.64E-12	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Oryza brachyantha]
COG	YP_004775215.1	1.00E-07	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9FL28\|FLS2_ARATH	1.00E-11	LRR receptor-like serine/threonine-protein kinase FLS2 (Precursor)
trEMBL	tr\|J3LAV0\|J3LAV0_ORYBR	2.00E-12	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB02G17670.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold02202	6711	9532	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002202s00037347.1	PF12799.2	LRR_4	10	46	2.10E-09

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	0.306
SRR1783600	control	0.265
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.108
DRR006524	Root Summer glycyrrhizin low producing strain	0.234
DRR006525	Leaf Summer glycyrrhizin high producing strain	33.555
DRR006526	Leaf Summer glycyrrhizin high producing strain	35.196

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.061
SRR2868004	Drought Stress (root)	0.602
SRR2967015	Control (root)	0.247

SRA Experiment	Description	TPM
SRR9715738	Leaf	64.936
SRR9715740	Leaf	66.725
SRR9715741	Leaf	78.346
SRR9715739	Root	0.082
SRR9715742	Root	1.268
SRR9715743	Root	0.673

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.323
SRR8749028	MeJA induced 9h	1.653
SRR8749029	MeJA induced 9h	2.234
SRR8749030	Uninduced	1.192
SRR8749031	Uninduced	0.341
SRR8749032	Uninduced	0.596

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.570
SRR8400027	Control - Root	0.817