Gene detail information of Glyur002191s00039374 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74940.1 | 7.00E-23 | Protein of unknown function (DUF581) |
| NR | XP_004488103.1 | 5.44E-107 | PREDICTED: uncharacterized protein LOC101495380 [Cicer arietinum] |
| trEMBL | tr|I3S700|I3S700_LOTJA | 5.00E-93 | Uncharacterized protein {ECO:0000313|EMBL:AFK36042.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02191 | 3416 | 4853 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002191s00039374.1 | PF04570.9 | DUF581 | 177 | 225 | 1.60E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.244 |
| SRR1783600 | control | 37.183 |
| SRR1783602 | moderate drought stress | 31.028 |
| SRR1811619 | moderate drought stress | 30.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 70.911 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.901 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.976 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.314 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.887 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.270 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.469 |
| SRR2868004 | Drought Stress (root) | 22.876 |
| SRR2967015 | Control (root) | 16.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.610 |
| SRR9715740 | Leaf | 2.546 |
| SRR9715741 | Leaf | 2.775 |
| SRR9715739 | Root | 5.243 |
| SRR9715742 | Root | 14.872 |
| SRR9715743 | Root | 11.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.120 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.233 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.655 |
| SRR8400027 | Control - Root | 24.967 |