Gene detail information of Glyur002187s00038979 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23160.1 | 1.00E-15 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 |
| NR | XP_003637981.1 | 2.32E-51 | Cysteine-rich receptor-like protein kinase [Medicago truncatula] |
| Swissprot | tr|Q8S9L6|CRK29_ARATH | 4.00E-18 | Cysteine-rich receptor-like protein kinase 29 (Precursor) |
| trEMBL | tr|G8A0Y1|G8A0Y1_MEDTR | 9.00E-52 | Cysteine-rich receptor-like protein kinase {ECO:0000313|EMBL:AES85119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02187 | 36322 | 41133 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002187s00038979.1 | PF01657.12 | Stress-antifung | 1 | 53 | 1.00E-05 |
| Glyur002187s00038979.1 | PF01657.12 | Stress-antifung | 68 | 171 | 3.90E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.012 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.168 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.110 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.115 |
| SRR2868004 | Drought Stress (root) | 0.640 |
| SRR2967015 | Control (root) | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.838 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 17.595 |
| SRR9715739 | Root | 0.056 |
| SRR9715742 | Root | 2.648 |
| SRR9715743 | Root | 1.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.077 |
| SRR8749031 | Uninduced | 0.267 |
| SRR8749032 | Uninduced | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.742 |
| SRR8400027 | Control - Root | 3.123 |