Gene detail information of Glyur002187s00038975.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77760.1 | 0 | nitrate reductase 1 |
| NR | ADV03138.1 | 0 | nitrate reductase 1 [Medicago truncatula] |
| COG | YP_001545630.1 | 1.00E-22 | sulfite oxidase [Herpetosiphon aurantiacus DSM 785] |
| Swissprot | tr|P39870|NIA2_SOYBN | 0 | Inducible nitrate reductase [NADH] 2 |
| trEMBL | tr|E7ELN6|E7ELN6_MEDTR | 0 | Nitrate reductase {ECO:0000256|PIRNR:PIRNR000233} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02187 | 8660 | 18713 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K10534 | NR | EC:1.7.1.1 1.7.1.2 1.7.1.3 | Nitrogen metabolism | map00910 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002187s00038975.1 | PF00174.14 | Oxidored_molyb | 5 | 57 | 1.50E-15 |
| Glyur002187s00038975.1 | PF03404.11 | Mo-co_dimer | 83 | 207 | 1.40E-44 |
| Glyur002187s00038975.1 | PF00970.19 | FAD_binding_6 | 329 | 436 | 3.50E-28 |
| Glyur002187s00038975.1 | PF00175.16 | NAD_binding_1 | 456 | 561 | 6.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.042 |
| SRR1783600 | control | 0.042 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.006 |