Gene detail information of Glyur002185s00036363 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61900.3 | 3.00E-08 | Calcium-dependent phospholipid-binding Copine family protein |
| NR | XP_003602749.1 | 4.37E-14 | WD repeat-containing protein, putative [Medicago truncatula] |
| Swissprot | tr|Q941L3|BON1_ARATH | 5.00E-09 | Protein BONZAI 1 |
| trEMBL | tr|G7J399|G7J399_MEDTR | 2.00E-14 | Transducin/WD40 repeat protein {ECO:0000313|EMBL:AES73000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02185 | 37551 | 39334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.164 |
| SRR1783600 | control | 16.520 |
| SRR1783602 | moderate drought stress | 14.751 |
| SRR1811619 | moderate drought stress | 14.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.759 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.215 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.011 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.089 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.702 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 45.436 |
| SRR9715740 | Leaf | 18.223 |
| SRR9715741 | Leaf | 71.596 |
| SRR9715739 | Root | 2.223 |
| SRR9715742 | Root | 19.923 |
| SRR9715743 | Root | 18.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.021 |
| SRR8400027 | Control - Root | 28.760 |